Version 2.78

Status Information

Status
DEPRECATED
Reason
Duplicate
Comment
Duplicate
Map-To Long Common Name Mapping Guidance
85496-8 Streptococcus pneumoniae serotype [Identifier] in Specimen by NAA with probe detection Duplicate

Part Description

LP253527-8   Streptococcus pneumoniae serotype
Streptococcus pneumoniae is an important human pathogen whose virulence is based primarily on its polysaccharide capsule, which protects it by shielding it from the immune system. Over time, study of the polysaccharide capsule has identified multiple serogroups and serotypes. Serotypes are defined based on the chemical structure and immunologic properties of the polysaccharide, and each serogroup contains one or more serotypes that elicit the same antibody response. Over time, two parallel serogroup and serotype naming systems arose, one in the U.S. and one in Denmark, but more recently, the Danish naming system is the one that has been widely adopted, including in the U.S. Beginning with the June 2017 release, LOINC adopted the Danish numbering system in the Component for all pneumococcal terms.
Out of more than 90 serotypes identified to date, only a third have been implicated in invasive disease, and there is also an association between specific serotypes, patient age, and mortality rate. For example, serotypes 1 and 5 are associated with invasive disease, and historically, serogroups 6, 14, 18, and 19 were more common among young children while serotype 3 was more common in the elderly. Vaccines have changed the prevalence of different serotypes and serogroups. Pneumococcal vaccines target the serotypes that are commonly implicated in human disease, and over time, the number of targeted serotypes have increased from 7 to 23. While widespread vaccination has significantly decreased the incidence of invasive pneumococcal disease caused by the serotypes covered by those vaccines, it has also caused a change in serotype prevalence in that strains that were rare are becoming more common. Therefore, determining the specific serotype responsible for new cases is important for epidemiologic tracking and future vaccine development.
PMID: 26085553 Source: Regenstrief LOINC

Fully-Specified Name

Component
Streptococcus pneumoniae serotype DNA
Property
ID
Time
Pt
System
XXX
Scale
Nom
Method
Probe.amp.tar

Additional Names

Short Name
Deprecated S pneum serotype DNA XXX NAA+probe
Display Name
S. pneumoniae type DNA NAA+probe (Specimen) [ID]
Consumer Name Alpha Get Info
Streptococcus pneumoniae serotype, Specimen

Example Answer List: LL4419-9

Source: Regenstrief LOINC
Answer Code Score Answer ID
Streptococcus pneumoniae Danish serotype 1 LA27117-3
Streptococcus pneumoniae Danish serotype 2 LA27118-1
Streptococcus pneumoniae Danish serotype 5 LA27121-5
Streptococcus pneumoniae Danish serotype 9 LA27291-6
Streptococcus pneumoniae Danish serotype 24 LA27292-4

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.61
Last Updated
Version 2.72
Order vs. Observation
Both

Language Variants Get Info

Tag Language Translation
es-ES Spanish (Spain) Streptococo pneumoniae serotipo ADN:Código identificador:Punto temporal:XXX:Nom:Sonda con amplificación dirigida
es-MX Spanish (Mexico) ADN del serotipo de Streptococo pneumoniae:Identificador:Punto temporal:XXX:Nominal:Amplificación de ácidos nucleicos con detección de sonda
fr-CA French (Canada) Streptococcus pneumoniae Sérotype, ADN:Identifiant:Temps ponctuel:XXX:Nominal:Sonde avec amplification de la cible
fr-FR French (France) Streptococcus pneumoniae sérotype ADN:Identifiant:Ponctuel:Milieux divers:Résultat nominal:PCR amplification de cible
it-IT Italian (Italy) Streptococcus pneumoniae, sierotipo DNA:ID:Pt:XXX:Nom:Sonda.amp.tar
Synonyms: Identificatore Microbiologia Punto nel tempo (episodio) Sierotipo Streptococcus pneumoniae Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
nl-NL Dutch (Netherlands) Streptococcus pneumoniae serotype DNA:identificator:moment:XXX:nominaal:probe-detectie
Synonyms: probe.amp.tar
zh-CN Chinese (China) 肺炎链球菌血清型 DNA:标识符:时间点:XXX:名义型:探针法.基因扩增.靶向
Synonyms: 不明的;其他;将在相应消息内其他部分之中加以详细说明;未作详细说明的;未作说明的;未做说明的标本;未加规定的;未加说明的标本;杂项 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 分类型应答;分类型结果;名义性;名称型;名词型;名词性;标称性;没有自然次序的名义型或分类型应答 去氧核糖核酸;脱氧核糖核酸 去氧核糖核酸;脱氧核糖核酸;脱氧核糖核酸（Deoxyribonucleic acid，DNA） 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 扩增型 扩增性 时刻;随机;随意;瞬间 标识;身份标识符;身份标识 球菌肺炎;肺双;肺炎双球菌;肺炎球菌;肺链;链球菌肺炎 经过扩增的 肺炎链球菌（肺炎球菌）血清型 脱氧核糖核酸探针

LOINC Terminology Service (API) using HL7® FHIR® Get Info

CodeSystem lookup
https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=86503-0