Version 2.78

Term Description

This panel includes terms with the general system Respiratory.lower as well as more specific codes for BAL and Sputum to accomodate different reporting styles for different analytes. This code was created for, but is not limited in use to, the BioFire Diagnostics FilmArray Pneumonia Panel, a multiplexed nucleic acid-based in vitro diagnostic test intended for use with the FilmArray Instrument for simultaneous semi-quantitative detection and identification of nucleic acids from multiple bacteria and viruses along with select genetic determinants of antimicrobial resistance directly from lower respiratory samples.
Source: Regenstrief LOINC

Panel Hierarchy

Details for each LOINC in Panel LHC-Forms

LOINC Name R/O/C Cardinality Example UCUM Units
92958-8 Respiratory pathogens DNA and RNA panel - Lower respiratory specimen by NAA with non-probe detection
Indent92989-3 Acinetobacter calcoaceticus-baumannii complex DNA [NCncRange] in Bronchoalveolar lavage by NAA with non-probe detection
Indent92988-5 Acinetobacter calcoaceticus-baumannii complex DNA [NCncRange] in Sputum by NAA with non-probe detection
Indent96317-3 Acinetobacter calcoaceticus-baumannii complex DNA [NCncRange] in Lower respiratory specimen by NAA with non-probe detection
Indent92985-1 Enterobacter cloacae complex DNA [NCncRange] in Bronchoalveolar lavage by NAA with non-probe detection
Indent92984-4 Enterobacter cloacae complex DNA [NCncRange] in Sputum by NAA with non-probe detection
Indent96318-1 Enterobacter cloacae complex DNA [NCncRange] in Lower respiratory specimen by NAA with non-probe detection
Indent92983-6 Escherichia coli DNA [NCncRange] in Bronchoalveolar lavage by NAA with non-probe detection
Indent92982-8 Escherichia coli DNA [NCncRange] in Sputum by NAA with non-probe detection
Indent96319-9 Escherichia coli DNA [NCncRange] in Lower respiratory specimen by NAA with non-probe detection
Indent92981-0 Haemophilus influenzae DNA [NCncRange] in Bronchoalveolar lavage by NAA with non-probe detection
Indent92980-2 Haemophilus influenzae DNA [NCncRange] in Sputum by NAA with non-probe detection
Indent96321-5 Haemophilus influenzae DNA [NCncRange] in Lower respiratory specimen by NAA with non-probe detection
Indent92975-2 Klebsiella aerogenes DNA [NCncRange] in Bronchoalveolar lavage by NAA with non-probe detection
Indent92974-5 Klebsiella aerogenes DNA [NCncRange] in Sputum by NAA with non-probe detection
Indent96323-1 Klebsiella aerogenes DNA [NCncRange] in Lower respiratory specimen by NAA with non-probe detection
Indent92973-7 Klebsiella oxytoca DNA [NCncRange] in Bronchoalveolar lavage by NAA with non-probe detection
Indent92972-9 Klebsiella oxytoca DNA [NCncRange] in Sputum by NAA with non-probe detection
Indent96322-3 Klebsiella oxytoca DNA [NCncRange] in Lower respiratory specimen by NAA with non-probe detection
Indent92971-1 Klebsiella pneumoniae+Klebsiella variicola+Klebsiella quasipneumoniae DNA [NCncRange] in Bronchoalveolar lavage by NAA with non-probe detection
Indent92970-3 Klebsiella pneumoniae+Klebsiella variicola+Klebsiella quasipneumoniae DNA [NCncRange] in Sputum by NAA with non-probe detection
Indent96324-9 Klebsiella pneumoniae+Klebsiella variicola+Klebsiella quasipneumoniae DNA [NCncRange] in Lower respiratory specimen by NAA with non-probe detection
Indent92966-1 Moraxella catarrhalis DNA [NCncRange] in Bronchoalveolar lavage by NAA with non-probe detection
Indent92965-3 Moraxella catarrhalis DNA [NCncRange] in Sputum by NAA with non-probe detection
Indent96325-6 Moraxella catarrhalis DNA [NCncRange] in Lower respiratory specimen by NAA with non-probe detection
Indent92962-0 Proteus sp DNA [NCncRange] in Bronchoalveolar lavage by NAA with non-probe detection
Indent92961-2 Proteus sp DNA [NCncRange] in Sputum by NAA with non-probe detection
Indent96327-2 Proteus sp DNA [NCncRange] in Lower respiratory specimen by NAA with non-probe detection
Indent92960-4 Pseudomonas aeruginosa DNA [NCncRange] in Bronchoalveolar lavage by NAA with non-probe detection
Indent92959-6 Pseudomonas aeruginosa DNA [NCncRange] in Sputum by NAA with non-probe detection
Indent96326-4 Pseudomonas aeruginosa DNA [NCncRange] in Lower respiratory specimen by NAA with non-probe detection
Indent92955-4 Serratia marcescens DNA [NCncRange] in Bronchoalveolar lavage by NAA with non-probe detection
Indent92954-7 Serratia marcescens DNA [NCncRange] in Sputum by NAA with non-probe detection
Indent96329-8 Serratia marcescens DNA [NCncRange] in Lower respiratory specimen by NAA with non-probe detection
Indent92953-9 Staphylococcus aureus DNA [NCncRange] in Bronchoalveolar lavage by NAA with non-probe detection
Indent92952-1 Staphylococcus aureus DNA [NCncRange] in Sputum by NAA with non-probe detection
Indent96328-0 Staphylococcus aureus DNA [NCncRange] in Lower respiratory specimen by NAA with non-probe detection
Indent92951-3 Streptococcus agalactiae DNA [NCncRange] in Bronchoalveolar lavage by NAA with non-probe detection
Indent92950-5 Streptococcus agalactiae DNA [NCncRange] in Sputum by NAA with non-probe detection
Indent96320-7 Streptococcus agalactiae DNA [NCncRange] in Lower respiratory specimen by NAA with non-probe detection
Indent92949-7 Streptococcus pneumoniae DNA [NCncRange] in Bronchoalveolar lavage by NAA with non-probe detection
Indent92948-9 Streptococcus pneumoniae DNA [NCncRange] in Sputum by NAA with non-probe detection
Indent96330-6 Streptococcus pneumoniae DNA [NCncRange] in Lower respiratory specimen by NAA with non-probe detection
Indent92947-1 Streptococcus pyogenes DNA [NCncRange] in Bronchoalveolar lavage by NAA with non-probe detection
Indent92946-3 Streptococcus pyogenes DNA [NCncRange] in Sputum by NAA with non-probe detection
Indent96331-4 Streptococcus pyogenes DNA [NCncRange] in Lower respiratory specimen by NAA with non-probe detection
Indent88250-6 Cephalosporin resistance blaCTX-M gene [Presence] by Molecular method
Indent85498-4 Carbapenem resistance blaIMP gene [Presence] by Molecular method
Indent49617-4 Carbapenem resistance blaKPC gene [Presence] by Molecular method
Indent92968-7 Methicillin resistance mecA+mecC genes [Presence] in Isolate or Specimen by Molecular genetics method
Indent73982-1 Carbapenem resistance blaNDM gene [Presence] by Molecular method
Indent85827-4 Carbapenem resistance bla OXA-48-like gene [Presence] by Molecular method
Indent85501-5 Carbapenem resistance blaVIM gene [Presence] by Molecular method
Indent96309-0 Methicillin resistance mecA+mecC genes+SCCmec+OrfX junction [Presence] by Molecular method
Indent92986-9 Chlamydophila pneumoniae DNA [Presence] in Lower respiratory specimen by NAA with non-probe detection
Indent92969-5 Legionella pneumophila DNA [Presence] in Lower respiratory specimen by NAA with non-probe detection
Indent92964-6 Mycoplasma pneumoniae DNA [Presence] in Lower respiratory specimen by NAA with non-probe detection
Indent92987-7 Adenovirus DNA [Presence] in Lower respiratory specimen by NAA with non-probe detection
Indent92979-4 Human coronavirus RNA [Presence] in Lower respiratory specimen by NAA with non-probe detection
Indent92978-6 Human metapneumovirus RNA [Presence] in Lower respiratory specimen by NAA with non-probe detection
Indent92956-2 Rhinovirus+Enterovirus RNA [Presence] in Lower respiratory specimen by NAA with non-probe detection
Indent92977-8 Influenza virus A RNA [Presence] in Lower respiratory specimen by NAA with non-probe detection
Indent92976-0 Influenza virus B RNA [Presence] in Lower respiratory specimen by NAA with non-probe detection
Indent92967-9 Middle East respiratory syndrome coronavirus (MERS-CoV) RNA [Presence] in Lower respiratory specimen by NAA with non-probe detection
Indent92963-8 Parainfluenza virus RNA [Presence] in Lower respiratory specimen by NAA with non-probe detection
Indent92957-0 Respiratory syncytial virus RNA [Presence] in Lower respiratory specimen by NAA with non-probe detection

Fully-Specified Name

Component
Respiratory pathogens DNA & RNA panel
Property
-
Time
Pt
System
Respiratory system specimen.lower
Scale
-
Method
Non-probe.amp.tar

Additional Names

Short Name
Resp path DNA+RNA Pnl L Resp NAA+non-prb
Display Name
Respiratory pathogens DNA and RNA panel NAA+non-probe (Lower resp)
Consumer Name Alpha Get Info
Respiratory Pathogens DNA and RNA Panel, Lower respiratory

Basic Attributes

Class
PANEL.MICRO
Type
Laboratory
First Released
Version 2.66
Last Updated
Version 2.77
Change Reason
Release 2.77: SYSTEM: Updated to standardize the representation of "Respiratory system specimen" in the System subhierarchy across LOINC;
Order vs. Observation
Both
Panel Type
Panel

Language Variants Get Info

Tag Language Translation
es-MX Spanish (Mexico) Panel de ADN y ARN de patógenos respiratorios:-:Punto temporal:Muestra de vías respiratorias inferiores:-:Amplificación de ácidos nucleicos con detección sin sonda
es-ES Spanish (Spain) Perfil espiratorio de virus y bacterias, ADN y ARN:Propiedades mixtas (sólo paneles):Punto temporal:Muestra de vías respiratorias inferiores:-:Amplificación del objetivo no basado en sonda
Synonyms: Muestra del tracto respiratorio Muestra respiratoria Tracto respiratorio
fr-FR French (France) Pathogènes respiratoires ADN et ARN panel:-:Ponctuel:Voies respiratoires inférieures:-:Non-PCR amplification de cible
it-IT Italian (Italy) Patogeni respiratori a DNA&RNA, panel:-:Pt:Campione da Sistema Respiratorio.inferiore:-:Non-sonda.amp.tar
Synonyms: Amplificazione target non basata su sonda Campione da Apparato Respiratorio Campione da apparato respiratorio inferiore Microbiologia Panel patogenie respiratoire DNA&RNA Punto nel tempo (episodio) Set di prescrizione microbiologia Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA

LOINC Terminology Service (API) using HL7® FHIR® Get Info

CodeSystem lookup
https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=92958-8
Questionnaire definition
https://fhir.loinc.org/Questionnaire/?url=http://loinc.org/q/92958-8